Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.81□□□□□ -1.64
RAB43Q86YS6 A2MP1-204ENST00000566278 4130 ntBASIC4.81□□□□□ -1.64
RAB43Q86YS6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAB43Q86YS6 AC003973.3-201ENST00000624863 2822 ntBASIC4.81□□□□□ -1.64
RAB43Q86YS6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAB43Q86YS6 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.81□□□□□ -1.64
RAB43Q86YS6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
RAB43Q86YS6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 GAPDHP15-201ENST00000398586 975 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 CHEK2P3-201ENST00000416118 248 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 RPL36AP10-201ENST00000421785 322 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AL360081.1-201ENST00000428299 555 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 RPS29P22-201ENST00000472363 168 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AC007686.1-201ENST00000488511 463 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AL671862.1-201ENST00000515851 349 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 AC016252.1-201ENST00000609721 474 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 AC073575.2-201ENST00000614212 627 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 MIPEPP2-201ENST00000422560 1819 ntBASIC4.8□□□□□ -1.64
RAB43Q86YS6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAB43Q86YS6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.8□□□□□ -1.64
RAB43Q86YS6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 CASC19-255ENST00000641733 1385 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 RN7SKP95-201ENST00000362860 303 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 RNA5SP223-201ENST00000365174 120 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 MIR589-201ENST00000385238 99 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 CBX1P3-201ENST00000413296 527 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 OR2AM1P-201ENST00000422137 422 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 OR5M12P-201ENST00000423388 929 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 RPSAP41-201ENST00000439695 860 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 AL354714.3-201ENST00000447284 493 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 RN7SL443P-201ENST00000464331 290 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 NIFKP7-201ENST00000503365 834 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 AC087783.2-201ENST00000605070 562 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 MTCO1P1-201ENST00000624263 1081 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 AP000542.2-201ENST00000623199 6179 ntBASIC4.79□□□□□ -1.64
RAB43Q86YS6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAB43Q86YS6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RAB43Q86YS6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 MAPK10-349ENST00000641767 3661 ntBASIC4.78□□□□□ -1.64
RAB43Q86YS6 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RAB43Q86YS6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB43Q86YS6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms