Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 RPS27AP13-201ENST00000498403 237 ntBASIC2.87□□□□□ -1.95
APOBP04114 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC2.87□□□□□ -1.95
APOBP04114 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 RLIMP1-201ENST00000339626 1680 ntBASIC2.87□□□□□ -1.95
APOBP04114 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 AC108467.2-201ENST00000617640 1597 ntBASIC2.87□□□□□ -1.95
APOBP04114 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
APOBP04114 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC2.87□□□□□ -1.95
APOBP04114 SNORA74C-1-201ENST00000580726 201 ntBASIC2.87□□□□□ -1.95
APOBP04114 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
APOBP04114 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.86□□□□□ -1.95
APOBP04114 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC2.86□□□□□ -1.95
APOBP04114 ARAFP2-201ENST00000440565 559 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC090142.1-201ENST00000465776 462 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC007688.1-201ENST00000475592 759 ntBASIC2.86□□□□□ -1.95
APOBP04114 RN7SKP83-201ENST00000516512 178 ntBASIC2.86□□□□□ -1.95
APOBP04114 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC2.86□□□□□ -1.95
APOBP04114 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC2.86□□□□□ -1.95
APOBP04114 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC2.86□□□□□ -1.95
APOBP04114 AC006116.5-201ENST00000591936 559 ntBASIC2.86□□□□□ -1.95
APOBP04114 RNU4-89P-201ENST00000607443 133 ntBASIC2.86□□□□□ -1.95
APOBP04114 MIR6867-201ENST00000610636 67 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC007786.3-201ENST00000615154 596 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC000095.2-202ENST00000637415 154 ntBASIC2.86□□□□□ -1.95
APOBP04114 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
APOBP04114 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 AL137058.3-201ENST00000624531 3099 ntBASIC2.86□□□□□ -1.95
APOBP04114 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 AL158163.1-201ENST00000603915 1649 ntBASIC2.86□□□□□ -1.95
APOBP04114 AL391684.1-202ENST00000641293 1636 ntBASIC2.86□□□□□ -1.95
APOBP04114 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
APOBP04114 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC2.86□□□□□ -1.95
APOBP04114 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.86□□□□□ -1.95
APOBP04114 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC2.86□□□□□ -1.95
APOBP04114 NDUFA5P1-201ENST00000433858 341 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC006326.1-201ENST00000445465 787 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC022336.1-201ENST00000475510 337 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.86□□□□□ -1.95
APOBP04114 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC2.86□□□□□ -1.95
APOBP04114 AC090515.3-201ENST00000560431 315 ntBASIC2.86□□□□□ -1.95
APOBP04114 AC096577.2-201ENST00000611455 153 ntBASIC2.86□□□□□ -1.95
APOBP04114 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC2.86□□□□□ -1.95
APOBP04114 CPHL1P-201ENST00000461341 3407 ntBASIC2.86□□□□□ -1.95
APOBP04114 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC2.86□□□□□ -1.95
APOBP04114 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
APOBP04114 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC2.86□□□□□ -1.95
APOBP04114 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC2.86□□□□□ -1.95
APOBP04114 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC2.86□□□□□ -1.95
APOBP04114 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
APOBP04114 MIR554-201ENST00000384874 96 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms