Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC068446.1-201ENST00000556425 1549 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC011155.1-201ENST00000316512 456 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 OR6K3-202ENST00000368146 996 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 U3.28-201ENST00000391249 210 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 GPS2P1-201ENST00000411761 986 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 RANP4-201ENST00000413361 655 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 RPL12P17-201ENST00000432393 498 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL590762.3-201ENST00000436372 640 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 SPRYD7P1-201ENST00000443861 570 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC016772.1-201ENST00000444170 1261 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 RANP1-206ENST00000455094 651 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL049829.1-201ENST00000465411 156 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 RPL35AP19-201ENST00000469425 329 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC005912.1-201ENST00000495392 255 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 HMGB1P3-201ENST00000502802 616 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 MTND6P2-201ENST00000512226 524 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 BX510359.5-201ENST00000515651 304 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 SNORA26.10-201ENST00000516427 141 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 RNU6-1308P-201ENST00000516817 103 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC068446.3-201ENST00000555285 382 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL049870.4-201ENST00000555741 486 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AP005403.1-201ENST00000579720 229 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 MIR3908-201ENST00000579798 126 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC090312.1-201ENST00000580637 348 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AC139769.3-201ENST00000618383 175 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 LINC01109-201ENST00000603837 3081 ntBASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP54Q7Z3B4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RN7SKP160-201ENST00000363804 340 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RNU4-31P-201ENST00000384211 141 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 U3.25-201ENST00000391209 220 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RPSAP35-201ENST00000413753 818 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AL133482.1-201ENST00000415988 498 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 MTND2P40-201ENST00000436718 841 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 HMGB3P9-201ENST00000441799 583 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AL672138.1-201ENST00000450604 1015 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 CBX1P2-201ENST00000453841 458 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RPL7P45-201ENST00000455851 743 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RPL23AP12-201ENST00000467573 473 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC093663.2-201ENST00000484625 313 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 OR9N1P-202ENST00000494289 481 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC108693.1-201ENST00000496068 432 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 HMGB1P44-201ENST00000508597 572 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 RNA5SP362-201ENST00000516048 118 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 HMGB1P46-201ENST00000520062 610 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 AC027176.2-201ENST00000559166 746 ntBASIC5.03□□□□□ -1.6
NUP54Q7Z3B4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms