Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CBX1P83916 AC027455.1-201ENST00000574104 594 ntBASIC5.08□□□□□ -1.6
CBX1P83916 MIR4502-201ENST00000580432 81 ntBASIC5.08□□□□□ -1.6
CBX1P83916 FAM27E4-201ENST00000605259 342 ntBASIC5.08□□□□□ -1.6
CBX1P83916 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.08□□□□□ -1.6
CBX1P83916 AC108673.3-201ENST00000609183 335 ntBASIC5.08□□□□□ -1.6
CBX1P83916 MIR6721-201ENST00000617181 87 ntBASIC5.08□□□□□ -1.6
CBX1P83916 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.08□□□□□ -1.6
CBX1P83916 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.08□□□□□ -1.6
CBX1P83916 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CBX1P83916 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CBX1P83916 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.08□□□□□ -1.6
CBX1P83916 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX1P83916 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.07□□□□□ -1.6
CBX1P83916 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CBX1P83916 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 SNORA70-201ENST00000384436 135 ntBASIC5.07□□□□□ -1.6
CBX1P83916 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CBX1P83916 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 HMGB3P7-201ENST00000400214 611 ntBASIC5.07□□□□□ -1.6
CBX1P83916 BX284632.2-201ENST00000421091 399 ntBASIC5.07□□□□□ -1.6
CBX1P83916 GSTM5P1-201ENST00000434751 660 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AL512605.1-202ENST00000441919 381 ntBASIC5.07□□□□□ -1.6
CBX1P83916 RPL6P30-201ENST00000443382 862 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AL359955.2-201ENST00000445380 353 ntBASIC5.07□□□□□ -1.6
CBX1P83916 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.07□□□□□ -1.6
CBX1P83916 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.07□□□□□ -1.6
CBX1P83916 CFL1P4-201ENST00000451536 498 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AC118758.1-202ENST00000454719 225 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.07□□□□□ -1.6
CBX1P83916 SEPT14P1-201ENST00000458703 648 ntBASIC5.07□□□□□ -1.6
CBX1P83916 RPS17P2-201ENST00000461663 408 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AC012158.1-204ENST00000483430 465 ntBASIC5.07□□□□□ -1.6
CBX1P83916 RPS3AP15-201ENST00000483874 781 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AC139783.2-201ENST00000504847 1145 ntBASIC5.07□□□□□ -1.6
CBX1P83916 UGT2A3P7-201ENST00000510485 734 ntBASIC5.07□□□□□ -1.6
CBX1P83916 IGLVIV-53-201ENST00000520107 367 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.07□□□□□ -1.6
CBX1P83916 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.07□□□□□ -1.6
CBX1P83916 AL512310.9-201ENST00000553311 948 ntBASIC5.07□□□□□ -1.6
CBX1P83916 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.07□□□□□ -1.6
CBX1P83916 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.07□□□□□ -1.6
CBX1P83916 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.07□□□□□ -1.6
CBX1P83916 MIR6793-201ENST00000612376 63 ntBASIC5.07□□□□□ -1.6
CBX1P83916 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.07□□□□□ -1.6
CBX1P83916 CU639417.4-201ENST00000623928 207 ntBASIC5.07□□□□□ -1.6
CBX1P83916 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CBX1P83916 AL445487.1-201ENST00000415694 1580 ntBASIC5.07□□□□□ -1.6
CBX1P83916 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.07□□□□□ -1.6
CBX1P83916 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX1P83916 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.06□□□□□ -1.6
CBX1P83916 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.06□□□□□ -1.6
CBX1P83916 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.06□□□□□ -1.6
CBX1P83916 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.06□□□□□ -1.6
CBX1P83916 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 RBBP4P5-201ENST00000398583 1266 ntBASIC5.06□□□□□ -1.6
CBX1P83916 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 AC092162.1-201ENST00000432828 434 ntBASIC5.06□□□□□ -1.6
CBX1P83916 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.06□□□□□ -1.6
CBX1P83916 MTND4LP12-201ENST00000448237 295 ntBASIC5.06□□□□□ -1.6
CBX1P83916 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.06□□□□□ -1.6
CBX1P83916 AL672138.1-201ENST00000450604 1015 ntBASIC5.06□□□□□ -1.6
CBX1P83916 AC104634.1-201ENST00000452720 462 ntBASIC5.06□□□□□ -1.6
CBX1P83916 VDAC2P4-201ENST00000452925 711 ntBASIC5.06□□□□□ -1.6
CBX1P83916 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.06□□□□□ -1.6
CBX1P83916 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.06□□□□□ -1.6
CBX1P83916 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.06□□□□□ -1.6
CBX1P83916 AC021006.1-201ENST00000489849 553 ntBASIC5.06□□□□□ -1.6
CBX1P83916 RN7SL649P-201ENST00000496974 275 ntBASIC5.06□□□□□ -1.6
CBX1P83916 SCARNA16.4-201ENST00000516956 187 ntBASIC5.06□□□□□ -1.6
CBX1P83916 RN7SKP35-201ENST00000517210 151 ntBASIC5.06□□□□□ -1.6
CBX1P83916 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.06□□□□□ -1.6
CBX1P83916 AP003396.4-201ENST00000527574 265 ntBASIC5.06□□□□□ -1.6
CBX1P83916 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.06□□□□□ -1.6
CBX1P83916 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.06□□□□□ -1.6
CBX1P83916 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.06□□□□□ -1.6
CBX1P83916 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.06□□□□□ -1.6
CBX1P83916 AP000919.1-201ENST00000582850 985 ntBASIC5.06□□□□□ -1.6
CBX1P83916 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.06□□□□□ -1.6
CBX1P83916 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.06□□□□□ -1.6
CBX1P83916 uc_338.29-201ENST00000615099 168 ntBASIC5.06□□□□□ -1.6
CBX1P83916 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 AL390318.1-201ENST00000624564 687 ntBASIC5.06□□□□□ -1.6
CBX1P83916 OR8G3P-202ENST00000641572 1255 ntBASIC5.06□□□□□ -1.6
CBX1P83916 CASC19-274ENST00000642018 970 ntBASIC5.06□□□□□ -1.6
CBX1P83916 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX1P83916 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms