Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CTNNA1P35221 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.46□□□□□ -1.54
CTNNA1P35221 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 AP001642.1-201ENST00000624727 2117 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 AL445437.1-201ENST00000623157 3087 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CTNNA1P35221 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 AC083799.1-201ENST00000366451 910 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CTNNA1P35221 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CTNNA1P35221 RNA5SP339-201ENST00000390987 122 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AL390316.1-201ENST00000406279 553 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 U3.32-201ENST00000408116 212 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.45□□□□□ -1.54
CTNNA1P35221 IPPKP1-201ENST00000422501 768 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.45□□□□□ -1.54
CTNNA1P35221 RPL34P6-201ENST00000432390 345 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 AC012075.1-201ENST00000436549 580 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.45□□□□□ -1.54
CTNNA1P35221 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.45□□□□□ -1.54
CTNNA1P35221 RPL7AP61-201ENST00000443410 636 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AC023512.1-201ENST00000444513 499 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 RSL24D1P2-201ENST00000445584 366 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 HMGN1P36-201ENST00000446623 298 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 RNA5SP103-201ENST00000459503 118 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 RPL35AP19-201ENST00000469425 329 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AC097173.1-201ENST00000505862 819 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AC108157.1-201ENST00000510511 539 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.45□□□□□ -1.54
CTNNA1P35221 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.45□□□□□ -1.54
CTNNA1P35221 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CTNNA1P35221 RPL10P14-201ENST00000565265 298 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.45□□□□□ -1.54
CTNNA1P35221 AC011840.5-201ENST00000582125 771 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 RN7SL435P-201ENST00000584418 282 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 AP005131.7-201ENST00000610087 611 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.45□□□□□ -1.54
CTNNA1P35221 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 AL359715.4-201ENST00000606629 1436 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 PHKBP1-201ENST00000450951 1951 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.45□□□□□ -1.54
CTNNA1P35221 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 ZNF652P1-201ENST00000442420 1309 ntBASIC5.45□□□□□ -1.54
CTNNA1P35221 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CTNNA1P35221 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CTNNA1P35221 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.45□□□□□ -1.54
CTNNA1P35221 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CTNNA1P35221 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CTNNA1P35221 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.44□□□□□ -1.54
CTNNA1P35221 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTNNA1P35221 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTNNA1P35221 RN7SKP124-201ENST00000364730 341 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CTNNA1P35221 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CTNNA1P35221 RNU6-244P-201ENST00000391028 104 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 OR8V1P-201ENST00000395193 873 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AL078599.1-201ENST00000402075 293 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.44□□□□□ -1.54
CTNNA1P35221 OR2AH1P-201ENST00000425717 928 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 MRPS33P4-201ENST00000434892 317 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.44□□□□□ -1.54
CTNNA1P35221 MTND6P18-201ENST00000439477 513 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 RNU6-1218P-201ENST00000458990 108 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.44□□□□□ -1.54
CTNNA1P35221 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC100832.1-201ENST00000471945 383 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC005412.2-201ENST00000492004 341 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 RN7SL447P-201ENST00000494711 245 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AC093770.1-201ENST00000511559 571 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.44□□□□□ -1.54
CTNNA1P35221 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.44□□□□□ -1.54
CTNNA1P35221 RNU6-760P-201ENST00000516078 97 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 RNU6-347P-201ENST00000516658 105 ntBASIC5.44□□□□□ -1.54
CTNNA1P35221 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms