Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MTND5P11-201ENST00000511037 1812 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 HSPA8P17-201ENST00000427029 1382 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 SOCS5P3-201ENST00000425115 1576 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 GAPDHP24-201ENST00000328713 983 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 SNORA64.1-201ENST00000362600 132 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 RNA5SP433-201ENST00000364491 114 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 OOSP1-201ENST00000398992 1270 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 RPS27AP11-201ENST00000402798 447 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL009179.1-201ENST00000406085 265 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC245060.4-201ENST00000413293 1121 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 RPSAP35-201ENST00000413753 818 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 BX664727.1-201ENST00000416024 466 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC066692.1-201ENST00000421721 457 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC104333.2-201ENST00000422630 192 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL354692.1-201ENST00000423044 315 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 RPS27P5-201ENST00000444247 244 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 CLIC4P1-201ENST00000453177 535 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL358876.1-201ENST00000453364 1075 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 HLA-DPA3-207ENST00000454398 229 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 TPT1P1-201ENST00000458495 518 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 RN7SL170P-201ENST00000487098 295 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 HMGN1P9-201ENST00000515212 298 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 TRIM51DP-201ENST00000529746 596 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC027369.5-201ENST00000533838 755 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL358913.1-201ENST00000554342 121 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL049870.4-201ENST00000555741 486 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 MIR4311-201ENST00000580794 100 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC015802.2-201ENST00000589690 189 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 BNIP3P27-201ENST00000599991 412 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC063977.5-201ENST00000601044 974 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AC007683.2-201ENST00000624681 714 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL596275.2-207ENST00000641188 675 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 AL731532.2-201ENST00000623542 1953 ntBASIC4.67□□□□□ -1.66
CCDC107Q8WV48 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC107Q8WV48 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 AC007382.1-201ENST00000624376 2618 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 AC007996.1-201ENST00000620414 2821 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 AP001642.1-201ENST00000624727 2117 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 RNA5SP30-201ENST00000365552 115 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 OR7E156P-201ENST00000400303 464 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 RNU2-18P-201ENST00000411224 162 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 RPL12P9-201ENST00000412942 488 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 PNRC2P1-201ENST00000423940 420 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC107Q8WV48 AL096829.2-201ENST00000446582 742 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 GXYLT1P1-201ENST00000446657 490 ntBASIC4.66□□□□□ -1.66
CCDC107Q8WV48 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms