Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.96□□□□□ -1.61
CLDN20P56880 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.96□□□□□ -1.61
CLDN20P56880 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLDN20P56880 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLDN20P56880 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN20P56880 LINC01963-201ENST00000562038 3148 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN20P56880 SNORA16A-201ENST00000384342 137 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN20P56880 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 AC093716.1-201ENST00000435923 377 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN20P56880 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN20P56880 SIAH1P1-201ENST00000479411 923 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AC108693.1-201ENST00000496068 432 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN20P56880 AC098976.1-201ENST00000513014 541 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN20P56880 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CLDN20P56880 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN20P56880 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN20P56880 OR5AM1P-201ENST00000532136 1032 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AC122688.1-201ENST00000541494 223 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN20P56880 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 AP005403.1-201ENST00000579720 229 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 H3F3BP2-201ENST00000583907 357 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AC068620.3-201ENST00000602749 560 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN20P56880 AP000864.1-201ENST00000609424 650 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AC016597.2-201ENST00000613256 341 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AC008759.3-201ENST00000613300 508 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 AC005840.5-201ENST00000619166 599 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 AP003476.1-201ENST00000623984 516 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN20P56880 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN20P56880 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 MTCO1P7-201ENST00000419523 1542 ntBASIC4.96□□□□□ -1.62
CLDN20P56880 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CLDN20P56880 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CLDN20P56880 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN20P56880 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.95□□□□□ -1.62
CLDN20P56880 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLDN20P56880 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN20P56880 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLDN20P56880 AC020633.1-201ENST00000468439 2247 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLDN20P56880 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLDN20P56880 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 AP000568.1-201ENST00000282964 442 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
CLDN20P56880 RNU6-252P-201ENST00000363232 107 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 RN7SKP162-201ENST00000363605 345 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN20P56880 RN7SKP59-201ENST00000410520 314 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 VN1R42P-201ENST00000424651 344 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN20P56880 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN20P56880 NDUFA5P10-201ENST00000432147 357 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN20P56880 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN20P56880 AL645931.1-201ENST00000439737 410 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 RPL7P55-201ENST00000450522 746 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 MTATP6P14-201ENST00000455189 673 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN20P56880 TPT1P1-201ENST00000458495 518 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC021660.1-201ENST00000465006 554 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AL133445.1-201ENST00000467051 452 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 TPT1P8-201ENST00000510120 555 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 BTG4P1-201ENST00000510421 183 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN20P56880 RNU5A-7P-201ENST00000515979 116 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 IGKV2-18-201ENST00000522607 343 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 HAUS1P3-201ENST00000523909 662 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.95□□□□□ -1.62
CLDN20P56880 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLDN20P56880 AC087888.1-201ENST00000550884 1254 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN20P56880 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN20P56880 RN7SL290P-201ENST00000578661 300 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 MIR4489-201ENST00000578869 62 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 MIR3176-201ENST00000582210 90 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC026741.1-201ENST00000605892 482 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC000068.2-201ENST00000608816 460 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AP000894.4-201ENST00000610185 483 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AC004241.3-201ENST00000611728 517 ntBASIC4.95□□□□□ -1.62
CLDN20P56880 AL512624.1-201ENST00000613638 469 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms