Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
VARSP26640 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
VARSP26640 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VARSP26640 AC005614.1-201ENST00000598952 3653 ntBASIC7.4□□□□□ -1.23
VARSP26640 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
VARSP26640 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.39□□□□□ -1.23
VARSP26640 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
VARSP26640 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 NAMPTP1-201ENST00000440465 2514 ntBASIC7.39□□□□□ -1.23
VARSP26640 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.39□□□□□ -1.23
VARSP26640 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VARSP26640 OR7E11P-202ENST00000642027 1491 ntBASIC7.39□□□□□ -1.23
VARSP26640 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.39□□□□□ -1.23
VARSP26640 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.39□□□□□ -1.23
VARSP26640 RNU6-492P-201ENST00000363035 104 ntBASIC7.39□□□□□ -1.23
VARSP26640 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 VN1R8P-201ENST00000407739 893 ntBASIC7.39□□□□□ -1.23
VARSP26640 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
VARSP26640 AC000362.1-201ENST00000433725 425 ntBASIC7.39□□□□□ -1.23
VARSP26640 AL606489.2-201ENST00000433886 234 ntBASIC7.39□□□□□ -1.23
VARSP26640 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VARSP26640 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.39□□□□□ -1.23
VARSP26640 AC007000.1-201ENST00000453064 794 ntBASIC7.39□□□□□ -1.23
VARSP26640 MTCO1P42-201ENST00000457379 726 ntBASIC7.39□□□□□ -1.23
VARSP26640 AC087385.2-201ENST00000477729 498 ntBASIC7.39□□□□□ -1.23
VARSP26640 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 RPL17P2-201ENST00000491913 451 ntBASIC7.39□□□□□ -1.23
VARSP26640 AC114300.1-201ENST00000502347 280 ntBASIC7.39□□□□□ -1.23
VARSP26640 PSMA2P2-201ENST00000504319 686 ntBASIC7.39□□□□□ -1.23
VARSP26640 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.39□□□□□ -1.23
VARSP26640 SSX8-201ENST00000506270 579 ntBASIC7.39□□□□□ -1.23
VARSP26640 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.39□□□□□ -1.23
VARSP26640 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.39□□□□□ -1.23
VARSP26640 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.39□□□□□ -1.23
VARSP26640 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.39□□□□□ -1.23
VARSP26640 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.39□□□□□ -1.23
VARSP26640 NMNAT1P1-201ENST00000554095 876 ntBASIC7.39□□□□□ -1.23
VARSP26640 AL109766.1-201ENST00000555080 552 ntBASIC7.39□□□□□ -1.23
VARSP26640 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 AL109918.3-201ENST00000603072 338 ntBASIC7.39□□□□□ -1.23
VARSP26640 AL953862.2-201ENST00000603089 820 ntBASIC7.39□□□□□ -1.23
VARSP26640 AC010591.1-201ENST00000603941 649 ntBASIC7.39□□□□□ -1.23
VARSP26640 AL359999.1-201ENST00000604513 294 ntBASIC7.39□□□□□ -1.23
VARSP26640 AL451085.1-201ENST00000604546 690 ntBASIC7.39□□□□□ -1.23
VARSP26640 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 AC090617.10-201ENST00000624308 134 ntBASIC7.39□□□□□ -1.23
VARSP26640 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.39□□□□□ -1.23
VARSP26640 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.39□□□□□ -1.23
VARSP26640 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARSP26640 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.38□□□□□ -1.23
VARSP26640 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
VARSP26640 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 AC022819.1-201ENST00000563495 3910 ntBASIC7.38□□□□□ -1.23
VARSP26640 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 GTF2H2B-203ENST00000508065 1432 ntBASIC7.38□□□□□ -1.23
VARSP26640 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 MTND4P35-201ENST00000604257 1375 ntBASIC7.38□□□□□ -1.23
VARSP26640 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.38□□□□□ -1.23
VARSP26640 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VARSP26640 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARSP26640 RNU6-223P-201ENST00000362830 107 ntBASIC7.38□□□□□ -1.23
VARSP26640 RNU6-216P-201ENST00000363282 104 ntBASIC7.38□□□□□ -1.23
VARSP26640 MIR555-201ENST00000384987 96 ntBASIC7.38□□□□□ -1.23
VARSP26640 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VARSP26640 RNU6-1106P-201ENST00000390845 107 ntBASIC7.38□□□□□ -1.23
VARSP26640 TMSB4XP8-201ENST00000402089 135 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms