Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
HOXD11P31277 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 OR1L6-202ENST00000373684 1044 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 Y_RNA.570-201ENST00000384750 101 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 U3.35-201ENST00000408405 208 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC9.62□□□□□ -0.87
HOXD11P31277 AC097527.1-201ENST00000437031 530 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 RPL23AP33-201ENST00000442301 452 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 AL356133.1-201ENST00000444762 372 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 AL360271.2-201ENST00000447710 161 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC9.62□□□□□ -0.87
HOXD11P31277 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC9.62□□□□□ -0.87
HOXD11P31277 PGAM1P1-201ENST00000504014 556 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 HSPD1P18-201ENST00000504252 244 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC9.62□□□□□ -0.87
HOXD11P31277 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 IGHVII-26-2-201ENST00000518751 325 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 AC023232.1-201ENST00000524963 285 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC9.62□□□□□ -0.87
HOXD11P31277 REG4-204ENST00000530654 612 ntTSL 5 BASIC9.62□□□□□ -0.87
HOXD11P31277 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC9.62□□□□□ -0.87
HOXD11P31277 AC136944.5-201ENST00000573021 151 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC9.62□□□□□ -0.87
HOXD11P31277 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC9.62□□□□□ -0.87
HOXD11P31277 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC9.62□□□□□ -0.87
HOXD11P31277 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC9.62□□□□□ -0.87
HOXD11P31277 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC9.62□□□□□ -0.87
HOXD11P31277 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
HOXD11P31277 Clostridiales-1.2-201ENST00000636724 160 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 SGSM1-202ENST00000400359 4317 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
HOXD11P31277 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
HOXD11P31277 MYH13-203ENST00000621918 5916 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 CTNNBL1-210ENST00000628103 1958 ntTSL 2 BASIC9.62□□□□□ -0.87
HOXD11P31277 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC9.62□□□□□ -0.87
HOXD11P31277 ADAM20P3-201ENST00000508710 2106 ntBASIC9.62□□□□□ -0.87
HOXD11P31277 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 ZCCHC8-210ENST00000633063 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 DPF3-215ENST00000610283 4520 ntTSL 2 BASIC9.62□□□□□ -0.87
HOXD11P31277 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
HOXD11P31277 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 AC092593.1-201ENST00000515413 1815 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 TTLL4-202ENST00000392102 4967 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 AL355602.1-201ENST00000641472 3402 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 INTS14-215ENST00000569491 1797 ntTSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
HOXD11P31277 RNA5SP71-201ENST00000362967 126 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 RNU6-288P-201ENST00000363690 104 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 RNU6-1226P-201ENST00000384317 107 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 MIR637-201ENST00000385000 99 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 RNU6-460P-201ENST00000391158 108 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 RPS4XP3-201ENST00000398541 413 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.61□□□□□ -0.87
HOXD11P31277 AIMP1P2-201ENST00000425294 312 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 AC010967.3-201ENST00000438648 213 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 AL356981.1-201ENST00000454879 684 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 RN7SL507P-201ENST00000474076 296 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 RPL36AP41-201ENST00000493820 306 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 RNU6-390P-201ENST00000516259 103 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC9.61□□□□□ -0.87
HOXD11P31277 AC009997.1-201ENST00000557862 129 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 B3GNTL1P2-201ENST00000603673 288 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC9.61□□□□□ -0.87
HOXD11P31277 AC005790.1-201ENST00000619774 450 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 MIR3914-2-201ENST00000637339 95 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 FGD3-201ENST00000337352 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 Z97200.1-201ENST00000606154 2045 ntBASIC9.61□□□□□ -0.87
HOXD11P31277 CHI3L2-203ENST00000445067 2169 ntAPPRIS P4 TSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 ZNF383-207ENST00000589413 2268 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
HOXD11P31277 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 AC004147.2-201ENST00000583224 3753 ntTSL 5 BASIC9.61□□□□□ -0.87
HOXD11P31277 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
HOXD11P31277 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
HOXD11P31277 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
HOXD11P31277 CYP24A1-201ENST00000216862 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
HOXD11P31277 CLGN-202ENST00000414773 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
HOXD11P31277 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms