Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC104454.1-201ENST00000421341 1401 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RNU6-1214P-201ENST00000363650 109 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RNA5SP478-201ENST00000364657 115 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 SNORA51.12-201ENST00000384448 134 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 SNORA40.2-201ENST00000390847 128 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 SNORA17A-201ENST00000391185 133 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL512422.1-201ENST00000407033 553 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL590084.1-201ENST00000407885 387 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 MIR1303-201ENST00000408625 86 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 GAPDHP49-201ENST00000421421 961 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RPL21P110-201ENST00000433345 446 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL391987.1-201ENST00000441025 200 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 HMGB1P48-201ENST00000446155 598 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RPS27AP3-201ENST00000453803 454 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 HLA-DPA3-207ENST00000454398 229 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 PPIAP19-201ENST00000486414 492 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RN7SL101P-201ENST00000496350 279 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 MTATP6P1-201ENST00000514057 681 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RNA5SP434-201ENST00000516647 121 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC023632.1-201ENST00000518463 375 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AP001858.2-201ENST00000536213 601 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC044913.1-201ENST00000557200 430 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 NPM1P47-201ENST00000560843 856 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 MIR3912-201ENST00000577566 105 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 MIR4666A-201ENST00000580160 79 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC027243.2-201ENST00000602530 724 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL008723.3-201ENST00000608926 449 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 uc_338.9-201ENST00000617424 182 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AC074140.1-201ENST00000621617 208 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 SNORA17.5-201ENST00000630429 132 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 OR7A1P-202ENST00000641542 1158 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 AL121768.1-201ENST00000613917 2544 ntBASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA6Q9Y5G7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 AL133243.2-201ENST00000610331 1621 ntBASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA6Q9Y5G7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms