Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
BHLHE41Q9C0J9 AC107980.1-201ENST00000558671 3355 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC127070.3-201ENST00000503695 3263 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 UGT2B26P-201ENST00000508672 1613 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 DBF4P1-201ENST00000412976 1892 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 OR4K15-201ENST00000305051 1216 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RNU6-462P-201ENST00000362659 105 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RNU6-582P-201ENST00000362989 107 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RN7SKP47-201ENST00000365347 328 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RPS3AP5-201ENST00000389400 821 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RNU6-780P-201ENST00000391030 104 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 TMBIM7P-201ENST00000418074 855 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 USP9YP20-201ENST00000419224 558 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC083875.1-201ENST00000419509 405 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 CHCHD3P1-201ENST00000425516 676 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 MTCYBP45-201ENST00000435243 565 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RPS19P6-201ENST00000441327 433 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AL139156.3-201ENST00000454802 394 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RPS20P24-201ENST00000457473 361 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC079944.1-201ENST00000485426 495 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 NENFP3-201ENST00000503735 313 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC021220.1-201ENST00000507445 630 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC114786.4-201ENST00000508771 728 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC105914.1-201ENST00000511798 226 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC011352.2-201ENST00000514574 1016 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 MTCO1P35-201ENST00000515270 228 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 RNU6-1261P-201ENST00000517194 104 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC092375.1-201ENST00000550410 637 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 DYNLL1P1-201ENST00000595442 269 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AP004247.3-201ENST00000608682 624 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC103710.4-201ENST00000609301 899 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC120057.5-201ENST00000623840 154 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AL132796.3-201ENST00000624703 900 ntBASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
BHLHE41Q9C0J9 AL354854.1-201ENST00000455940 1363 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 AC095038.1-201ENST00000429248 1591 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 QRSL1P1-201ENST00000400977 1540 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 Y_RNA.25-201ENST00000362528 102 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 Y_RNA.89-201ENST00000363031 102 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 RNU6-534P-201ENST00000364877 106 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 U8.14-201ENST00000390843 143 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 RNU4-55P-201ENST00000410731 137 ntBASIC6.57□□□□□ -1.36
BHLHE41Q9C0J9 USP9YP27-201ENST00000418455 438 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms