Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 CASC19-205ENST00000641013 1411 ntBASIC7.34□□□□□ -1.23
NPAS3Q8IXF0 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.34□□□□□ -1.24
NPAS3Q8IXF0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.34□□□□□ -1.24
NPAS3Q8IXF0 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC108467.2-201ENST00000617640 1597 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC007382.1-201ENST00000624376 2618 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC102941.1-201ENST00000567616 1537 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AF131215.2-201ENST00000531549 1710 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 OR52K3P-202ENST00000641797 1729 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RNU1-5P-201ENST00000362684 144 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 Y_RNA.387-201ENST00000383918 102 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RNU6-908P-201ENST00000410160 94 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RNA5SP118-201ENST00000410385 109 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RPL7AP51-201ENST00000422016 760 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC000089.1-201ENST00000424559 801 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 GAPDHP51-201ENST00000426454 1000 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC018804.1-201ENST00000430381 618 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC242426.1-201ENST00000435270 960 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 MYL6P3-201ENST00000436904 432 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RPL7AP71-201ENST00000451120 739 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC104634.1-201ENST00000452720 462 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RN7SL870P-201ENST00000460111 296 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RN7SL168P-201ENST00000463821 279 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC026336.1-201ENST00000466577 351 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RN7SL88P-201ENST00000480166 299 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC068781.1-201ENST00000488231 618 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC034159.1-201ENST00000513885 583 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 PTP4A1P6-201ENST00000531034 478 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC044913.1-201ENST00000557200 430 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 PPIAP14-201ENST00000577627 496 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC011500.1-201ENST00000601963 469 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC024560.3-201ENST00000608482 349 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AL359091.2-201ENST00000609303 556 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC005858.3-201ENST00000624756 589 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 CRYM-AS1-204ENST00000637983 556 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC061975.5-201ENST00000584928 1441 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AL035555.1-201ENST00000404462 1790 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 CCAT2-201ENST00000630920 1752 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 AC018688.1-201ENST00000636528 1754 ntBASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS3Q8IXF0 MTND5P30-201ENST00000452896 1731 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 OR51A10P-201ENST00000307165 937 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 OR52B1P-201ENST00000316506 909 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 Y_RNA.184-201ENST00000363884 108 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AL359715.1-201ENST00000404330 555 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MIR548F4-201ENST00000408515 105 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 NAP1L1P2-201ENST00000414182 1089 ntBASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS3Q8IXF0 AC007435.1-201ENST00000421086 415 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms