Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RTL9Q8NET4 AC083837.1-201ENST00000565297 2994 ntBASIC6.16□□□□□ -1.42
RTL9Q8NET4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RTL9Q8NET4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.15□□□□□ -1.42
RTL9Q8NET4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.15□□□□□ -1.42
RTL9Q8NET4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RTL9Q8NET4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RTL9Q8NET4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.15□□□□□ -1.42
RTL9Q8NET4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RTL9Q8NET4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
RTL9Q8NET4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
RTL9Q8NET4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RTL9Q8NET4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RTL9Q8NET4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 RPL32P3-201ENST00000359025 275 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 RN7SKP186-201ENST00000365371 303 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RTL9Q8NET4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RTL9Q8NET4 AC091180.1-201ENST00000462104 372 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 AC006967.1-201ENST00000467608 589 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 AC034205.1-201ENST00000520621 638 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 NDUFB4P11-201ENST00000560510 395 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 AC040958.1-201ENST00000561102 201 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 SMG1P7-201ENST00000565246 2704 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.15□□□□□ -1.43
RTL9Q8NET4 SAMMSON-226ENST00000642089 1582 ntBASIC6.15□□□□□ -1.43
RTL9Q8NET4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RTL9Q8NET4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
RTL9Q8NET4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 AL356317.1-201ENST00000396110 1436 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 AC007618.1-201ENST00000366455 732 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 AL035079.1-201ENST00000405210 287 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 BX510359.2-201ENST00000417920 305 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 RPL18P10-201ENST00000425606 538 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 AC004980.3-201ENST00000447046 365 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 AC000111.2-201ENST00000448200 210 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 AC116562.1-201ENST00000485355 781 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 SCARNA22-201ENST00000503991 125 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 AC087821.1-201ENST00000623639 567 ntBASIC6.14□□□□□ -1.43
RTL9Q8NET4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL9Q8NET4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RTL9Q8NET4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL9Q8NET4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL9Q8NET4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL9Q8NET4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 ZNF652P1-201ENST00000442420 1309 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 SNORA70.10-201ENST00000384515 134 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 RPL12P9-201ENST00000412942 488 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC068287.1-201ENST00000430283 295 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 TXNP5-201ENST00000441043 315 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 STRADBP1-201ENST00000478954 1281 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC026979.1-201ENST00000492525 396 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AP000619.2-201ENST00000546014 969 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL9Q8NET4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL9Q8NET4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL9Q8NET4 AL132640.2-201ENST00000559968 1698 ntBASIC6.13□□□□□ -1.43
RTL9Q8NET4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms