Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 AC005839.1-201ENST00000624148 3213 ntBASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LYSMD3Q7Z3D4 ZNF37BP-203ENST00000452306 1352 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 KARSP2-201ENST00000415696 1639 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 Y_RNA.128-201ENST00000363391 112 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 RNA5SP442-201ENST00000365050 107 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 U3.14-201ENST00000365363 227 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 SNORA51.12-201ENST00000384448 134 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AL139135.1-201ENST00000412675 209 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC211486.3-201ENST00000412694 621 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 GTF2IP20-201ENST00000431663 360 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AL354983.1-201ENST00000434580 906 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 MTND6P13-201ENST00000443510 523 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 RPSAP7-201ENST00000456871 885 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 RPL34P33-201ENST00000486062 334 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC146944.3-201ENST00000509969 371 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 LINC01085-203ENST00000511195 326 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 RNU6-416P-201ENST00000516265 103 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 IGKV1D-32-201ENST00000517449 318 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AP003084.1-201ENST00000524828 742 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 BRD9P1-201ENST00000529855 560 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 OR4C1P-201ENST00000530880 937 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AP003034.1-201ENST00000534621 422 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 ELOCP31-201ENST00000540463 467 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC009955.2-201ENST00000597288 542 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AL391646.1-201ENST00000603860 190 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AL078624.2-201ENST00000605063 554 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC012510.1-201ENST00000607946 759 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 PTCHD3P1-201ENST00000612350 537 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 MIR6883-201ENST00000614952 78 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC091905.1-201ENST00000624400 311 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC016251.2-201ENST00000623393 3089 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 AC138915.4-201ENST00000565549 4147 ntBASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.2□□□□□ -1.26
LYSMD3Q7Z3D4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms