Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 LINC00328-2P-201ENST00000436585 219 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 LDHAP2-201ENST00000437325 985 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AC083855.1-201ENST00000440041 258 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 FUNDC2P2-202ENST00000443452 493 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 SS18L2P1-201ENST00000445923 213 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC096741.1-201ENST00000472250 846 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AC079382.1-201ENST00000493346 557 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 RPL15P21-201ENST00000495592 567 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 TECRP2-201ENST00000503270 928 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 KLRA1P-201ENST00000503499 986 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 POU5F1P7-201ENST00000508759 541 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AC093809.1-201ENST00000509155 340 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 SUMO2P7-201ENST00000511179 285 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AC025465.4-201ENST00000513422 638 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 RNA5SP116-201ENST00000516132 98 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 SCARNA6.1-201ENST00000516989 238 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 NMNAT1P1-201ENST00000554095 876 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 ZNF322P1-201ENST00000568013 1209 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 MIR6849-201ENST00000618543 69 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PDGFAP04085 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 AL136221.1-201ENST00000621449 509 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AP003122.6-201ENST00000623831 495 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AC068880.5-201ENST00000624331 290 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 AL359697.1-201ENST00000624879 587 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 OR7E161P-202ENST00000641994 1033 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 CAP1P2-201ENST00000417455 1409 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 OR4G11P-202ENST00000642116 1414 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.73□□□□□ -1.33
PDGFAP04085 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
PDGFAP04085 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 AC092326.2-201ENST00000624772 1561 ntBASIC6.73□□□□□ -1.33
PDGFAP04085 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PDGFAP04085 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.73□□□□□ -1.33
PDGFAP04085 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 AC006116.1-201ENST00000587908 2171 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 FARSBP1-201ENST00000435808 1778 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 OR4A15-201ENST00000314706 1035 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 GAPDHP24-201ENST00000328713 983 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 RNU6-116P-201ENST00000384042 109 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 RNU6-533P-201ENST00000384144 107 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 MIR191-201ENST00000384873 92 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 VN1R8P-201ENST00000407739 893 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 RPS6P23-201ENST00000413224 722 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC004690.1-201ENST00000418216 328 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC006509.1-201ENST00000420788 634 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AL672212.1-201ENST00000422246 400 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 FDPSP1-201ENST00000424976 1071 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms