Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN2BO60939 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN2BO60939 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN2BO60939 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN2BO60939 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN2BO60939 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN2BO60939 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN2BO60939 BMS1P3-201ENST00000372011 932 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 HMGB3P7-201ENST00000400214 611 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 OR3A2-201ENST00000408891 1076 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN2BO60939 AC108075.1-201ENST00000424692 529 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN2BO60939 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN2BO60939 AL121776.1-201ENST00000429337 372 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 RPL7L1P9-201ENST00000431298 745 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 HMGB3P10-201ENST00000434734 572 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 TXNP5-201ENST00000441043 315 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN2BO60939 AL591473.1-201ENST00000464297 313 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 RN7SL443P-201ENST00000464331 290 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN2BO60939 GTF2F2P1-201ENST00000511083 675 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 BX510359.5-201ENST00000515651 304 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN2BO60939 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN2BO60939 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN2BO60939 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.79□□□□□ -1.64
SCN2BO60939 MTND2P17-201ENST00000550281 688 ntBASIC4.79□□□□□ -1.64
SCN2BO60939 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN2BO60939 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN2BO60939 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN2BO60939 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.79□□□□□ -1.64
SCN2BO60939 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN2BO60939 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN2BO60939 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN2BO60939 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SCN2BO60939 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
SCN2BO60939 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCN2BO60939 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN2BO60939 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 BRAFP1-201ENST00000445336 2703 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SCN2BO60939 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN2BO60939 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.78□□□□□ -1.64
SCN2BO60939 MIR143-201ENST00000385300 106 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 ATP5HP3-201ENST00000396994 486 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 AC013429.2-201ENST00000418798 781 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN2BO60939 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN2BO60939 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 AL031584.1-201ENST00000447169 754 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 AC011225.1-201ENST00000457751 369 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SCN2BO60939 ENPP7P9-201ENST00000514456 627 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 IGKV3D-34-201ENST00000522638 302 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 AC018442.3-201ENST00000523025 183 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.78□□□□□ -1.64
SCN2BO60939 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN2BO60939 DPRXP4-201ENST00000578053 568 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.78□□□□□ -1.64
SCN2BO60939 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.78□□□□□ -1.64
SCN2BO60939 AC011445.2-201ENST00000599274 173 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 AL159169.2-201ENST00000610061 1269 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 AC037198.3-201ENST00000616754 526 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.78□□□□□ -1.64
SCN2BO60939 AP003499.2-201ENST00000624100 483 ntBASIC4.78□□□□□ -1.64
SCN2BO60939 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SCN2BO60939 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SCN2BO60939 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SCN2BO60939 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.78□□□□□ -1.64
SCN2BO60939 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SCN2BO60939 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SCN2BO60939 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 RN7SKP113-201ENST00000363891 295 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms