Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC112243.1-201ENST00000623949 3851 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AL009179.1-201ENST00000406085 265 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 OR6C71P-201ENST00000432580 913 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 NRBF2P3-201ENST00000432731 865 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 RPL7P28-201ENST00000437739 740 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AL133547.1-201ENST00000448546 220 ntBASIC4.68□□□□□ -1.66
CHD8Q9HCK8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CHD8Q9HCK8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC011933.1-201ENST00000413334 321 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 MRPL35P4-201ENST00000453682 566 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 RN7SL303P-201ENST00000469773 251 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 MTND4LP31-201ENST00000514859 294 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC090136.1-201ENST00000520009 240 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 OR4A17P-201ENST00000526032 904 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC084757.4-201ENST00000616350 526 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 SAMMSON-210ENST00000641260 1308 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 RNU1-74P-201ENST00000384108 171 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 RNA5SP397-201ENST00000391323 118 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 OSTCP1-201ENST00000455507 450 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 RPL7P40-201ENST00000481703 745 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 SOX5P1-201ENST00000524155 1127 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC024224.1-201ENST00000538284 609 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC009237.13-201ENST00000603193 276 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC012468.1-201ENST00000604888 430 ntBASIC4.67□□□□□ -1.66
CHD8Q9HCK8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.67□□□□□ -1.66
CHD8Q9HCK8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 RPS29P17-201ENST00000430795 166 ntBASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AC015795.1-201ENST00000513669 327 ntBASIC4.66□□□□□ -1.66
CHD8Q9HCK8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms