Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-450P-201ENST00000364654 107 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 CUBN-201ENST00000377823 705 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 Y_RNA.496-201ENST00000384444 101 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 MIR1302-6-201ENST00000408466 90 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 UBE2FP1-201ENST00000416536 447 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 SLC35E1P1-201ENST00000419313 864 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 EIF4EP1-201ENST00000422311 642 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 RSL24D1P6-201ENST00000426934 401 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC096775.1-201ENST00000437724 448 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 ATP5LP2-201ENST00000440646 311 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 RPL26P28-201ENST00000451325 435 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 TCEAL4P1-201ENST00000453620 588 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC087385.2-201ENST00000477729 498 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC011853.1-201ENST00000518911 454 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 IGHVII-49-1-201ENST00000521760 224 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 SSU72P6-201ENST00000532644 488 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC126323.4-201ENST00000566935 234 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AL021918.1-201ENST00000603933 236 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC009779.6-201ENST00000603972 165 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 BCRP9-201ENST00000605312 388 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC004832.4-201ENST00000608952 331 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC140479.4-205ENST00000636339 820 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 OR52H1-202ENST00000641796 1061 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 OR6M2P-202ENST00000641780 2063 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC104083.1-201ENST00000569449 2615 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VARS2Q5ST30 AC104447.1-201ENST00000624214 2124 ntBASIC8.29□□□□□ -1.08
VARS2Q5ST30 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
VARS2Q5ST30 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 ERCC6-202ENST00000374127 1782 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 RNU6-1290P-201ENST00000362957 109 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 Y_RNA.373-201ENST00000365600 103 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 Y_RNA.530-201ENST00000384587 101 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 RNU6-823P-201ENST00000391042 103 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 COX6A1P3-201ENST00000404167 293 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VARS2Q5ST30 SNORA11.5-201ENST00000408163 128 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 RNU6-193P-201ENST00000410977 107 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC108032.1-201ENST00000416706 207 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC093155.2-201ENST00000420734 937 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC8.28□□□□□ -1.08
VARS2Q5ST30 FDPSP6-201ENST00000425091 512 ntBASIC8.28□□□□□ -1.08
VARS2Q5ST30 AC007559.1-201ENST00000428736 355 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms