Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NOC2LP1-202ENST00000452600 2235 ntBASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 AL512408.1-201ENST00000569378 2000 ntBASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 LTB4R2-202ENST00000528054 3092 ntBASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA4Q9Y5G9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 AC023632.3-201ENST00000521633 145 ntBASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 MTDHP1-201ENST00000605323 784 ntBASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 AC124016.1-201ENST00000609552 612 ntBASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 AL049637.2-201ENST00000641778 930 ntBASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 AL162377.1-201ENST00000618844 1793 ntBASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA4Q9Y5G9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 AC239809.2-201ENST00000415381 517 ntBASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 AP001412.1-201ENST00000608405 714 ntBASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA4Q9Y5G9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA4Q9Y5G9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms