Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 CDV3P1-201ENST00000471403 739 ntBASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 AP001160.3-201ENST00000601484 763 ntBASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 LTB4R2-202ENST00000528054 3092 ntBASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
PCDHGB1Q9Y5G3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 SLC7A5P1-201ENST00000568957 537 ntBASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 AC006333.2-201ENST00000607957 2099 ntBASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGB1Q9Y5G3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 AC104187.1-201ENST00000607510 612 ntBASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 AL133373.2-201ENST00000623187 2828 ntBASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 RBM17P2-201ENST00000616397 1405 ntBASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHGB1Q9Y5G3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 AL354751.1-201ENST00000412768 1863 ntBASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGB1Q9Y5G3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms