Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 AC026471.5-201ENST00000615068 467 ntBASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 AC009237.14-201ENST00000609975 1594 ntBASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB9Q9Y5E1 AP006587.1-201ENST00000534129 1502 ntBASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 KRT18P35-201ENST00000510488 1269 ntBASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 AL049597.2-201ENST00000565575 961 ntBASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 NBPF21P-201ENST00000425093 1451 ntBASIC19.86■□□□□ 0.77
PCDHB9Q9Y5E1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 MMP23A-201ENST00000234610 1017 ntBASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 RN7SL850P-201ENST00000579959 291 ntBASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 AL590326.2-201ENST00000625139 305 ntBASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB9Q9Y5E1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 AP003071.4-201ENST00000562276 1284 ntBASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB9Q9Y5E1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB9Q9Y5E1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms