Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 NBPF21P-201ENST00000425093 1451 ntBASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 AC073912.3-201ENST00000624414 853 ntBASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.9■□□□□ 0.46
RPH3AQ9Y2J0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPH3AQ9Y2J0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 AC110285.5-201ENST00000611501 352 ntBASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
RPH3AQ9Y2J0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 UBE2SP1-201ENST00000450587 669 ntBASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 AP006587.1-201ENST00000534129 1502 ntBASIC17.88■□□□□ 0.45
RPH3AQ9Y2J0 TFP1-202ENST00000475455 1573 ntBASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPH3AQ9Y2J0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms