Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.62■□□□□ 0.41
RCE1Q9Y256 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCE1Q9Y256 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.62■□□□□ 0.41
RCE1Q9Y256 UNC93B4-201ENST00000505679 747 ntBASIC17.62■□□□□ 0.41
RCE1Q9Y256 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCE1Q9Y256 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RCE1Q9Y256 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RCE1Q9Y256 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCE1Q9Y256 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 TNXA-203ENST00000507684 2038 ntBASIC17.61■□□□□ 0.41
RCE1Q9Y256 AL691432.2-201ENST00000607222 2038 ntBASIC17.61■□□□□ 0.41
RCE1Q9Y256 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 AC008687.6-201ENST00000596318 630 ntBASIC17.61■□□□□ 0.41
RCE1Q9Y256 AC120498.8-201ENST00000614275 531 ntBASIC17.61■□□□□ 0.41
RCE1Q9Y256 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 AC004408.2-201ENST00000623613 2777 ntBASIC17.61■□□□□ 0.41
RCE1Q9Y256 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCE1Q9Y256 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RCE1Q9Y256 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 RPS2P52-201ENST00000469610 820 ntBASIC17.6■□□□□ 0.41
RCE1Q9Y256 AP003097.1-201ENST00000530657 1135 ntBASIC17.6■□□□□ 0.41
RCE1Q9Y256 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 AL121906.2-201ENST00000621597 723 ntBASIC17.6■□□□□ 0.41
RCE1Q9Y256 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.6■□□□□ 0.41
RCE1Q9Y256 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 AC009237.14-201ENST00000609975 1594 ntBASIC17.6■□□□□ 0.41
RCE1Q9Y256 TMEM179-206ENST00000616017 1645 ntBASIC17.6■□□□□ 0.41
RCE1Q9Y256 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCE1Q9Y256 AL158211.5-201ENST00000623583 2518 ntBASIC17.6■□□□□ 0.41
RCE1Q9Y256 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 AC116351.2-201ENST00000606540 1585 ntBASIC17.59■□□□□ 0.41
RCE1Q9Y256 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RCE1Q9Y256 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RCE1Q9Y256 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms