Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 AL596275.1-201ENST00000423464 877 ntBASIC18.36■□□□□ 0.53
RNF6Q9Y252 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 DPP3P2-201ENST00000416030 1696 ntBASIC18.35■□□□□ 0.53
RNF6Q9Y252 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 AC026471.1-201ENST00000564629 3026 ntBASIC18.35■□□□□ 0.53
RNF6Q9Y252 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
RNF6Q9Y252 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF6Q9Y252 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 KRT18P68-201ENST00000392293 1000 ntBASIC18.34■□□□□ 0.53
RNF6Q9Y252 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 AC007322.3-201ENST00000426526 701 ntBASIC18.34■□□□□ 0.53
RNF6Q9Y252 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF6Q9Y252 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF6Q9Y252 BX119927.1-201ENST00000636596 1552 ntBASIC18.34■□□□□ 0.53
RNF6Q9Y252 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF6Q9Y252 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RNF6Q9Y252 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF6Q9Y252 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RNF6Q9Y252 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RNF6Q9Y252 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF6Q9Y252 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF6Q9Y252 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF6Q9Y252 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF6Q9Y252 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF6Q9Y252 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF6Q9Y252 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF6Q9Y252 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms