Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 AC023632.3-201ENST00000521633 145 ntBASIC17.4■□□□□ 0.38
COPS3Q9UNS2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COPS3Q9UNS2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.39■□□□□ 0.38
COPS3Q9UNS2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COPS3Q9UNS2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPS3Q9UNS2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 LINC01465-201ENST00000408887 1940 ntBASIC17.39■□□□□ 0.37
COPS3Q9UNS2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 AL589743.5-201ENST00000616611 1050 ntBASIC17.39■□□□□ 0.37
COPS3Q9UNS2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 AC008694.1-202ENST00000636953 945 ntBASIC17.39■□□□□ 0.37
COPS3Q9UNS2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.39■□□□□ 0.37
COPS3Q9UNS2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 AC093787.1-201ENST00000450396 207 ntBASIC17.38■□□□□ 0.37
COPS3Q9UNS2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COPS3Q9UNS2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 BID-214ENST00000617586 542 ntTSL 5 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 AC231657.2-201ENST00000624556 255 ntBASIC17.37■□□□□ 0.37
COPS3Q9UNS2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.37■□□□□ 0.37
COPS3Q9UNS2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms