Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGB4Q9UN71 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 AC069236.1-201ENST00000604339 616 ntBASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGB4Q9UN71 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 AC011767.1-201ENST00000617410 1153 ntBASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 AC068338.2-201ENST00000563278 1430 ntBASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGB4Q9UN71 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.89■□□□□ 0.62
PCDHGB4Q9UN71 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 LTB4R2-202ENST00000528054 3092 ntBASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 KRT18P68-201ENST00000392293 1000 ntBASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 DUX4L16-201ENST00000555130 1264 ntBASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 MIR5787-201ENST00000611784 55 ntBASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 KRT16P6-202ENST00000425692 1426 ntBASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 KRT8P17-201ENST00000453110 1448 ntBASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGB4Q9UN71 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGB4Q9UN71 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGB4Q9UN71 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms