Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 AL391422.3-201ENST00000603791 2761 ntBASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB8Q9UN66 AC099778.1-201ENST00000568593 1911 ntBASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 RCC2P6-201ENST00000526625 1557 ntBASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 CLDN5-201ENST00000403084 2357 ntBASIC20.78■□□□□ 0.92
PCDHB8Q9UN66 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 AC145285.6-201ENST00000604632 637 ntBASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 AC130371.2-201ENST00000619443 611 ntBASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB8Q9UN66 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHB8Q9UN66 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHB8Q9UN66 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHB8Q9UN66 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHB8Q9UN66 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 NAPSB-206ENST00000562112 1266 ntBASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 AP005242.2-201ENST00000580065 1175 ntBASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB8Q9UN66 CYP2D8P-201ENST00000433633 1490 ntBASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 AC004951.3-201ENST00000418645 1148 ntBASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 AC011298.2-201ENST00000617989 482 ntBASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHB8Q9UN66 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms