Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SALL4Q9UJQ4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SALL4Q9UJQ4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SALL4Q9UJQ4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
SALL4Q9UJQ4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SALL4Q9UJQ4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SALL4Q9UJQ4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.77■□□□□ 0.91
SALL4Q9UJQ4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 AF201337.1-201ENST00000520239 748 ntBASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 AC008694.1-202ENST00000636953 945 ntBASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 TEX21P-204ENST00000641479 1693 ntBASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 AC116351.2-201ENST00000606540 1585 ntBASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
SALL4Q9UJQ4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 CD99P1-205ENST00000527459 561 ntBASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SALL4Q9UJQ4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 AL512625.2-201ENST00000417533 625 ntBASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL4Q9UJQ4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms