Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 AC233702.5-201ENST00000584107 538 ntBASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 AC124016.1-201ENST00000609552 612 ntBASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.76■□□□□ 0.75
NCKIPSDQ9NZQ3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 BX119927.1-201ENST00000636596 1552 ntBASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 RPS2P55-201ENST00000397318 883 ntBASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 SNORA78-201ENST00000459373 127 ntBASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 AC107956.1-201ENST00000494359 873 ntBASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 AC110285.5-201ENST00000611501 352 ntBASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 AC116562.4-201ENST00000641316 2276 ntBASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 AL158211.5-201ENST00000623583 2518 ntBASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCKIPSDQ9NZQ3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCKIPSDQ9NZQ3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 PRKY-204ENST00000533551 1019 ntBASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NCKIPSDQ9NZQ3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms