Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SDHAF3Q9NRP4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 AL359736.2-201ENST00000621992 437 ntBASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SDHAF3Q9NRP4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 UBE2SP1-201ENST00000450587 669 ntBASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 KRT16P5-201ENST00000455284 522 ntBASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SDHAF3Q9NRP4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 AL158047.1-201ENST00000445918 881 ntBASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 KRT18P16-201ENST00000510337 1294 ntBASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SDHAF3Q9NRP4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms