Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 PHGDH-210ENST00000641115 1638 ntBASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARHGEF4Q9NR80 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 AC009237.14-201ENST00000609975 1594 ntBASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 NBPF21P-201ENST00000425093 1451 ntBASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARHGEF4Q9NR80 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ARHGEF4Q9NR80 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 KRT16P5-201ENST00000455284 522 ntBASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 AP001271.2-201ENST00000624018 1556 ntBASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARHGEF4Q9NR80 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ARHGEF4Q9NR80 LINC01023-201ENST00000606054 436 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms