Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NECTIN3Q9NQS3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
NECTIN3Q9NQS3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
NECTIN3Q9NQS3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 AP000974.1-201ENST00000623909 2387 ntBASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 PRORSD1P-201ENST00000295112 541 ntBASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 AC069544.1-201ENST00000609399 999 ntBASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NECTIN3Q9NQS3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NECTIN3Q9NQS3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 BX119927.1-201ENST00000636596 1552 ntBASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NECTIN3Q9NQS3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms