Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.64■□□□□ 0.41
HINT3Q9NQE9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 AL512625.2-201ENST00000417533 625 ntBASIC17.63■□□□□ 0.41
HINT3Q9NQE9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.63■□□□□ 0.41
HINT3Q9NQE9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HINT3Q9NQE9 MKRN4P-201ENST00000444706 1521 ntBASIC17.62■□□□□ 0.41
HINT3Q9NQE9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 AL355802.2-201ENST00000402069 882 ntBASIC17.62■□□□□ 0.41
HINT3Q9NQE9 AC023632.3-201ENST00000521633 145 ntBASIC17.62■□□□□ 0.41
HINT3Q9NQE9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HINT3Q9NQE9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 AC093787.1-201ENST00000450396 207 ntBASIC17.61■□□□□ 0.41
HINT3Q9NQE9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HINT3Q9NQE9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms