Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
C12orf4Q9NQ89 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 BX119927.1-201ENST00000636596 1552 ntBASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 AC019069.1-201ENST00000610008 1333 ntBASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C12orf4Q9NQ89 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 TMEM179-206ENST00000616017 1645 ntBASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 AC125437.2-201ENST00000625180 2167 ntBASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 AC099398.1-201ENST00000567919 2776 ntBASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 AC004854.2-201ENST00000608450 1441 ntBASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.92■□□□□ 0.3
C12orf4Q9NQ89 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.91■□□□□ 0.3
C12orf4Q9NQ89 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms