Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 TPRG1LP1-201ENST00000598702 760 ntBASIC17.73■□□□□ 0.43
HMG20AQ9NP66 HTR7P1-202ENST00000624664 4411 ntBASIC17.73■□□□□ 0.43
HMG20AQ9NP66 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20AQ9NP66 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 AC090164.3-201ENST00000610780 2143 ntBASIC17.72■□□□□ 0.43
HMG20AQ9NP66 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.72■□□□□ 0.43
HMG20AQ9NP66 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
HMG20AQ9NP66 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20AQ9NP66 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20AQ9NP66 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20AQ9NP66 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20AQ9NP66 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20AQ9NP66 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 IRS3P-201ENST00000223076 1006 ntBASIC17.7■□□□□ 0.42
HMG20AQ9NP66 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 EEF1DP3-203ENST00000566025 782 ntBASIC17.7■□□□□ 0.42
HMG20AQ9NP66 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 AC053503.5-201ENST00000601508 636 ntBASIC17.7■□□□□ 0.42
HMG20AQ9NP66 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 PRORSD1P-202ENST00000563365 2154 ntBASIC17.7■□□□□ 0.42
HMG20AQ9NP66 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HMG20AQ9NP66 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms