Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 AC007322.4-201ENST00000509611 723 ntBASIC21.82■■□□□ 1.08
CBX8Q9HC52 MFSD11-216ENST00000590393 1141 ntBASIC21.82■■□□□ 1.08
CBX8Q9HC52 AC100791.3-201ENST00000617619 330 ntBASIC21.82■■□□□ 1.08
CBX8Q9HC52 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CBX8Q9HC52 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CBX8Q9HC52 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CBX8Q9HC52 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.81■■□□□ 1.08
CBX8Q9HC52 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CBX8Q9HC52 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 RARRES2P4-201ENST00000514074 484 ntBASIC21.8■■□□□ 1.08
CBX8Q9HC52 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.8■■□□□ 1.08
CBX8Q9HC52 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CBX8Q9HC52 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 AL390961.4-201ENST00000623958 2535 ntBASIC21.79■■□□□ 1.08
CBX8Q9HC52 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.79■■□□□ 1.08
CBX8Q9HC52 AC135050.7-201ENST00000624508 2218 ntBASIC21.79■■□□□ 1.08
CBX8Q9HC52 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.79■■□□□ 1.08
CBX8Q9HC52 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 KRT18P68-201ENST00000392293 1000 ntBASIC21.79■■□□□ 1.08
CBX8Q9HC52 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.79■■□□□ 1.08
CBX8Q9HC52 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.79■■□□□ 1.08
CBX8Q9HC52 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CBX8Q9HC52 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CBX8Q9HC52 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CBX8Q9HC52 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms