Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 AC131212.1-201ENST00000613771 668 ntBASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 MIR6084-201ENST00000622012 110 ntBASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 AC079598.2-202ENST00000546624 1451 ntBASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.08□□□□□ -0.32
SND1-IT1Q9HBX3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 AC008406.3-201ENST00000620001 1374 ntBASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 IRS3P-201ENST00000223076 1006 ntBASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 AC105265.2-201ENST00000467189 838 ntBASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 AL136967.2-201ENST00000623968 743 ntBASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 AL049812.1-201ENST00000432563 2267 ntBASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SND1-IT1Q9HBX3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 AC091799.1-201ENST00000422823 811 ntBASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 AP001160.3-201ENST00000601484 763 ntBASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SND1-IT1Q9HBX3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms