Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CHMP4BQ9H444 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 PRKY-204ENST00000533551 1019 ntBASIC24.65■■□□□ 1.54
CHMP4BQ9H444 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CHMP4BQ9H444 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 KRT8P8-201ENST00000434750 1448 ntBASIC24.64■■□□□ 1.54
CHMP4BQ9H444 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHMP4BQ9H444 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHMP4BQ9H444 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHMP4BQ9H444 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
CHMP4BQ9H444 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHMP4BQ9H444 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHMP4BQ9H444 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.64■■□□□ 1.53
CHMP4BQ9H444 Z82202.1-201ENST00000623446 1880 ntBASIC24.64■■□□□ 1.53
CHMP4BQ9H444 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHMP4BQ9H444 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 KRT18P16-201ENST00000510337 1294 ntBASIC24.62■■□□□ 1.53
CHMP4BQ9H444 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CHMP4BQ9H444 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 TUBB8P6-201ENST00000436895 1288 ntBASIC24.61■■□□□ 1.53
CHMP4BQ9H444 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHMP4BQ9H444 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms