Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC68Q9H2F9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 AC090340.1-201ENST00000620778 4980 ntBASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 AC006557.6-201ENST00000623071 864 ntBASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 HLA-B-256ENST00000639848 1089 ntBASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 AC133041.1-202ENST00000642053 222 ntBASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 AC116351.2-201ENST00000606540 1585 ntBASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 AL020996.1-203ENST00000536896 2307 ntBASIC19.56■□□□□ 0.72
CCDC68Q9H2F9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 TREX1-205ENST00000625293 1783 ntBASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 MYC-209ENST00000641252 345 ntBASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC68Q9H2F9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 AC060766.5-201ENST00000590539 871 ntBASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC68Q9H2F9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC68Q9H2F9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms