Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC009237.14-201ENST00000609975 1594 ntBASIC20.28■□□□□ 0.84
RNF38Q9H0F5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF38Q9H0F5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 AC145285.6-201ENST00000604632 637 ntBASIC20.27■□□□□ 0.84
RNF38Q9H0F5 AC010947.1-201ENST00000623454 693 ntBASIC20.27■□□□□ 0.84
RNF38Q9H0F5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF38Q9H0F5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF38Q9H0F5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF38Q9H0F5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF38Q9H0F5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.27■□□□□ 0.83
RNF38Q9H0F5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.27■□□□□ 0.83
RNF38Q9H0F5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
RNF38Q9H0F5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF38Q9H0F5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF38Q9H0F5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 RCC2P6-201ENST00000526625 1557 ntBASIC20.25■□□□□ 0.83
RNF38Q9H0F5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 AC112907.3-201ENST00000577781 2400 ntBASIC20.25■□□□□ 0.83
RNF38Q9H0F5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF38Q9H0F5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 PKD1P6-201ENST00000343738 4769 ntBASIC20.24■□□□□ 0.83
RNF38Q9H0F5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 LINC01465-201ENST00000408887 1940 ntBASIC20.24■□□□□ 0.83
RNF38Q9H0F5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF38Q9H0F5 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms