Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.82■□□□□ 0.76
PHACTR1Q9C0D0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 KRT17P1-201ENST00000399211 1546 ntBASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 TEX21P-204ENST00000641479 1693 ntBASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PHACTR1Q9C0D0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 ZNF815P-204ENST00000434898 1737 ntBASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 AC007322.1-201ENST00000426983 750 ntBASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHACTR1Q9C0D0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 GPX1P1-201ENST00000388829 606 ntBASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHACTR1Q9C0D0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHACTR1Q9C0D0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms