Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 AC125437.2-201ENST00000625180 2167 ntBASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2Q9BSQ5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 KRT8P8-201ENST00000434750 1448 ntBASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2Q9BSQ5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2Q9BSQ5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.21■□□□□ 0.66
CCM2Q9BSQ5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 AL135905.2-201ENST00000584934 1404 ntBASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2Q9BSQ5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms