Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 AL355355.2-201ENST00000442321 338 ntBASIC15.19■□□□□ 0.02
DUX3Q96PT4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 BX088651.1-201ENST00000540551 451 ntBASIC15.19■□□□□ 0.02
DUX3Q96PT4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 AP003071.4-201ENST00000562276 1284 ntBASIC15.19■□□□□ 0.02
DUX3Q96PT4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.19■□□□□ 0.02
DUX3Q96PT4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUX3Q96PT4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 PHGDH-210ENST00000641115 1638 ntBASIC15.18■□□□□ 0.02
DUX3Q96PT4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 AL512408.1-201ENST00000569378 2000 ntBASIC15.18■□□□□ 0.02
DUX3Q96PT4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 AC211429.1-201ENST00000415277 523 ntBASIC15.18■□□□□ 0.02
DUX3Q96PT4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 AC116351.2-201ENST00000606540 1585 ntBASIC15.18■□□□□ 0.02
DUX3Q96PT4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
DUX3Q96PT4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
DUX3Q96PT4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 AL157384.1-201ENST00000445995 2473 ntBASIC15.17■□□□□ 0.02
DUX3Q96PT4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 AL353807.1-201ENST00000427475 662 ntBASIC15.17■□□□□ 0.02
DUX3Q96PT4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 CR392000.1-201ENST00000624770 1228 ntBASIC15.17■□□□□ 0.02
DUX3Q96PT4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
DUX3Q96PT4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
DUX3Q96PT4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms