Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 AL390961.4-201ENST00000623958 2535 ntBASIC14.92□□□□□ -0.02
LINC00479Q96M42 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00479Q96M42 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00479Q96M42 AC019069.1-201ENST00000610008 1333 ntBASIC14.92□□□□□ -0.02
LINC00479Q96M42 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 AC097381.1-201ENST00000429019 1296 ntBASIC14.91□□□□□ -0.02
LINC00479Q96M42 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00479Q96M42 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LINC00479Q96M42 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 SLC7A5P1-201ENST00000568957 537 ntBASIC14.9□□□□□ -0.02
LINC00479Q96M42 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LINC00479Q96M42 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00479Q96M42 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 CYP21A1P-202ENST00000354927 1481 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms