Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.61■□□□□ 0.57
ITCHQ96J02 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.61■□□□□ 0.57
ITCHQ96J02 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.61■□□□□ 0.57
ITCHQ96J02 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.61■□□□□ 0.57
ITCHQ96J02 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.6■□□□□ 0.57
ITCHQ96J02 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.6■□□□□ 0.57
ITCHQ96J02 AL512625.2-201ENST00000417533 625 ntBASIC18.6■□□□□ 0.57
ITCHQ96J02 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
ITCHQ96J02 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.6■□□□□ 0.57
ITCHQ96J02 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ITCHQ96J02 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITCHQ96J02 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.6■□□□□ 0.57
ITCHQ96J02 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.59■□□□□ 0.57
ITCHQ96J02 KRT17P1-201ENST00000399211 1546 ntBASIC18.59■□□□□ 0.57
ITCHQ96J02 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.59■□□□□ 0.57
ITCHQ96J02 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ITCHQ96J02 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.59■□□□□ 0.57
ITCHQ96J02 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.59■□□□□ 0.57
ITCHQ96J02 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ITCHQ96J02 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ITCHQ96J02 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITCHQ96J02 AC018553.1-201ENST00000616682 1458 ntBASIC18.58■□□□□ 0.57
ITCHQ96J02 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITCHQ96J02 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.58■□□□□ 0.57
ITCHQ96J02 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.58■□□□□ 0.57
ITCHQ96J02 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITCHQ96J02 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ITCHQ96J02 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITCHQ96J02 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ITCHQ96J02 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITCHQ96J02 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.58■□□□□ 0.57
ITCHQ96J02 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.58■□□□□ 0.57
ITCHQ96J02 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ITCHQ96J02 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.58■□□□□ 0.56
ITCHQ96J02 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ITCHQ96J02 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.58■□□□□ 0.56
ITCHQ96J02 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.58■□□□□ 0.56
ITCHQ96J02 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.58■□□□□ 0.56
ITCHQ96J02 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ITCHQ96J02 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ITCHQ96J02 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ITCHQ96J02 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ITCHQ96J02 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ITCHQ96J02 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.58■□□□□ 0.56
ITCHQ96J02 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.58■□□□□ 0.56
ITCHQ96J02 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ITCHQ96J02 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.57■□□□□ 0.56
ITCHQ96J02 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.57■□□□□ 0.56
ITCHQ96J02 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.57■□□□□ 0.56
ITCHQ96J02 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ITCHQ96J02 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ITCHQ96J02 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.57■□□□□ 0.56
ITCHQ96J02 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms