Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.8■□□□□ 0.76
SHDQ96IW2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.8■□□□□ 0.76
SHDQ96IW2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.8■□□□□ 0.76
SHDQ96IW2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SHDQ96IW2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.8■□□□□ 0.76
SHDQ96IW2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHDQ96IW2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SHDQ96IW2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.79■□□□□ 0.76
SHDQ96IW2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.79■□□□□ 0.76
SHDQ96IW2 AP003041.3-201ENST00000527151 707 ntBASIC19.79■□□□□ 0.76
SHDQ96IW2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.79■□□□□ 0.76
SHDQ96IW2 ZNF444P1-201ENST00000559497 298 ntBASIC19.79■□□□□ 0.76
SHDQ96IW2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.79■□□□□ 0.76
SHDQ96IW2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.79■□□□□ 0.76
SHDQ96IW2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.79■□□□□ 0.76
SHDQ96IW2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.79■□□□□ 0.76
SHDQ96IW2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SHDQ96IW2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHDQ96IW2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SHDQ96IW2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.78■□□□□ 0.76
SHDQ96IW2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.78■□□□□ 0.76
SHDQ96IW2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.78■□□□□ 0.76
SHDQ96IW2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SHDQ96IW2 PLK5-205ENST00000642079 1969 ntBASIC19.78■□□□□ 0.76
SHDQ96IW2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHDQ96IW2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHDQ96IW2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHDQ96IW2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHDQ96IW2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.78■□□□□ 0.76
SHDQ96IW2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.78■□□□□ 0.76
SHDQ96IW2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.78■□□□□ 0.76
SHDQ96IW2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHDQ96IW2 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.78■□□□□ 0.76
SHDQ96IW2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.78■□□□□ 0.76
SHDQ96IW2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHDQ96IW2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.78■□□□□ 0.76
SHDQ96IW2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.78■□□□□ 0.76
SHDQ96IW2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SHDQ96IW2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHDQ96IW2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.78■□□□□ 0.76
SHDQ96IW2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.77■□□□□ 0.76
SHDQ96IW2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.77■□□□□ 0.76
SHDQ96IW2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SHDQ96IW2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SHDQ96IW2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.77■□□□□ 0.76
SHDQ96IW2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SHDQ96IW2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.77■□□□□ 0.76
SHDQ96IW2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 KRT18P38-201ENST00000449496 1282 ntBASIC19.77■□□□□ 0.76
SHDQ96IW2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.77■□□□□ 0.76
SHDQ96IW2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
SHDQ96IW2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.77■□□□□ 0.76
SHDQ96IW2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
SHDQ96IW2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
SHDQ96IW2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHDQ96IW2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SHDQ96IW2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.77■□□□□ 0.75
SHDQ96IW2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SHDQ96IW2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SHDQ96IW2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.76■□□□□ 0.75
SHDQ96IW2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SHDQ96IW2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.76■□□□□ 0.75
SHDQ96IW2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SHDQ96IW2 AC112907.2-201ENST00000448639 330 ntBASIC19.76■□□□□ 0.75
SHDQ96IW2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.76■□□□□ 0.75
SHDQ96IW2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.76■□□□□ 0.75
SHDQ96IW2 CKBP1-201ENST00000565489 1086 ntBASIC19.76■□□□□ 0.75
SHDQ96IW2 NEK4P2-201ENST00000580004 1012 ntBASIC19.76■□□□□ 0.75
SHDQ96IW2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.76■□□□□ 0.75
SHDQ96IW2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.76■□□□□ 0.75
SHDQ96IW2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms