Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC97Q96F63 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC97Q96F63 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC97Q96F63 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CCDC97Q96F63 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC97Q96F63 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC97Q96F63 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 AC008550.1-201ENST00000511500 884 ntBASIC19.89■□□□□ 0.77
CCDC97Q96F63 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC97Q96F63 AC073648.6-201ENST00000641589 218 ntBASIC19.89■□□□□ 0.77
CCDC97Q96F63 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC97Q96F63 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC97Q96F63 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC97Q96F63 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC97Q96F63 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC97Q96F63 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC97Q96F63 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC97Q96F63 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC97Q96F63 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC97Q96F63 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC97Q96F63 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.88■□□□□ 0.77
CCDC97Q96F63 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.87■□□□□ 0.77
CCDC97Q96F63 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC97Q96F63 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC97Q96F63 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC97Q96F63 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC97Q96F63 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC97Q96F63 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC97Q96F63 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC97Q96F63 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC97Q96F63 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC97Q96F63 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms