Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.22■□□□□ 0.35
AP3S1Q92572 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.22■□□□□ 0.35
AP3S1Q92572 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.22■□□□□ 0.35
AP3S1Q92572 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.22■□□□□ 0.35
AP3S1Q92572 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 AL133373.2-201ENST00000623187 2828 ntBASIC17.22■□□□□ 0.35
AP3S1Q92572 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
AP3S1Q92572 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.22■□□□□ 0.35
AP3S1Q92572 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP3S1Q92572 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S1Q92572 WIZP1-201ENST00000531444 2299 ntBASIC17.22■□□□□ 0.35
AP3S1Q92572 AP000997.3-201ENST00000623333 2250 ntBASIC17.22■□□□□ 0.35
AP3S1Q92572 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
AP3S1Q92572 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3S1Q92572 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
AP3S1Q92572 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP3S1Q92572 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
AP3S1Q92572 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
AP3S1Q92572 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP3S1Q92572 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 BICD1-207ENST00000551848 1962 ntBASIC17.21■□□□□ 0.35
AP3S1Q92572 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.21■□□□□ 0.35
AP3S1Q92572 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.21■□□□□ 0.35
AP3S1Q92572 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.21■□□□□ 0.35
AP3S1Q92572 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 NOC2LP1-202ENST00000452600 2235 ntBASIC17.21■□□□□ 0.35
AP3S1Q92572 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
AP3S1Q92572 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP3S1Q92572 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.21■□□□□ 0.35
AP3S1Q92572 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S1Q92572 KRT16P6-202ENST00000425692 1426 ntBASIC17.21■□□□□ 0.34
AP3S1Q92572 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S1Q92572 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S1Q92572 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S1Q92572 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP3S1Q92572 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
AP3S1Q92572 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 AL354751.1-201ENST00000412768 1863 ntBASIC17.2■□□□□ 0.34
AP3S1Q92572 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AP3S1Q92572 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP3S1Q92572 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3S1Q92572 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP3S1Q92572 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AP3S1Q92572 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3S1Q92572 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3S1Q92572 PGM5P4-201ENST00000421970 445 ntBASIC17.2■□□□□ 0.34
AP3S1Q92572 AC007322.3-201ENST00000426526 701 ntBASIC17.2■□□□□ 0.34
AP3S1Q92572 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.2■□□□□ 0.34
AP3S1Q92572 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.2■□□□□ 0.34
AP3S1Q92572 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 AC233992.3-201ENST00000607491 485 ntBASIC17.2■□□□□ 0.34
AP3S1Q92572 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3S1Q92572 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.2■□□□□ 0.34
AP3S1Q92572 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.2■□□□□ 0.34
AP3S1Q92572 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.2■□□□□ 0.34
AP3S1Q92572 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 Z98044.1-201ENST00000632503 1764 ntBASIC17.2■□□□□ 0.34
AP3S1Q92572 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S1Q92572 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.19■□□□□ 0.34
AP3S1Q92572 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.19■□□□□ 0.34
AP3S1Q92572 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.19■□□□□ 0.34
AP3S1Q92572 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.19■□□□□ 0.34
AP3S1Q92572 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms