Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.08■■□□□ 1.29
STAG1Q8WVM7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
STAG1Q8WVM7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.08■■□□□ 1.29
STAG1Q8WVM7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
STAG1Q8WVM7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 NIFKP9-201ENST00000419265 221 ntBASIC23.07■■□□□ 1.28
STAG1Q8WVM7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
STAG1Q8WVM7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 AFG3L1P-217ENST00000557444 2447 ntBASIC23.06■■□□□ 1.28
STAG1Q8WVM7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 AC113410.3-201ENST00000623366 203 ntBASIC23.06■■□□□ 1.28
STAG1Q8WVM7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
STAG1Q8WVM7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 TSPY7P-201ENST00000431358 1114 ntBASIC23.05■■□□□ 1.28
STAG1Q8WVM7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 HLA-A-209ENST00000638375 975 ntBASIC23.05■■□□□ 1.28
STAG1Q8WVM7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
STAG1Q8WVM7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.04■■□□□ 1.28
STAG1Q8WVM7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
STAG1Q8WVM7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 AP002982.1-201ENST00000492365 877 ntBASIC23.03■■□□□ 1.28
STAG1Q8WVM7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 AC073195.1-201ENST00000607241 877 ntBASIC23.03■■□□□ 1.28
STAG1Q8WVM7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
STAG1Q8WVM7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms