Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 AL390961.4-201ENST00000623958 2535 ntBASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 AC123595.1-201ENST00000440769 1046 ntBASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD2Q8NHY2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 PGM5P4-201ENST00000421970 445 ntBASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 CDV3P1-201ENST00000471403 739 ntBASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFWD2Q8NHY2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 KRT16P6-202ENST00000425692 1426 ntBASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 AL133373.2-201ENST00000623187 2828 ntBASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 KRT18P14-201ENST00000534205 1250 ntBASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 KRT18P20-201ENST00000548986 1279 ntBASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFWD2Q8NHY2 HCG11-201ENST00000411553 5696 ntBASIC19.27■□□□□ 0.67
RFWD2Q8NHY2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD2Q8NHY2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD2Q8NHY2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD2Q8NHY2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RFWD2Q8NHY2 AC135050.7-201ENST00000624508 2218 ntBASIC19.27■□□□□ 0.67
RFWD2Q8NHY2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RFWD2Q8NHY2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RFWD2Q8NHY2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.26■□□□□ 0.67
RFWD2Q8NHY2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD2Q8NHY2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD2Q8NHY2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFWD2Q8NHY2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms